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Peter Cv Bil Hobby  Links  Køretøjer  Modeltog  Patinering	Interface Specification A valid reslicing module is a Matlab function with the following structure (Part of code from Reslice.m). function imgO=Reslice(Struct,method,sincparms); % % function imgO=Reslice(Struct,[method]); % % Function to reslice an Analyze image using % affine 12-parameter transformation matrix. % % Inputs: % % Struct has the fields % hdrI - input file Analyze header % hdrO - output file Analyze header % A - 12 parm. affine transformation matrix % for application xyzO=A*xyzI. A is in % real world (mm) coordinates. % [imgI] - optional field. If Struct has this field, % the input data are taken from here. Otherwise, % the image given in hdrI.name is loaded. % [imgO] - optional field. If Struct has this field, the output % is non-empty, and no datafile is written to disk. % % method - defines what interpolation method to use. If none % is given, 'linear' is assumed. % % Output: % imgO - Output Analyze Img data. only non-empty if the field % 'imgO' exists in Struct. % % Warning: Output is written to hdr0.name without checking. % Checking should be done beforehand, e.g. using uiputfile. % hdr.origin information is assumed correct. % % % Note: A third input parameter - sincparms - is unused, but % needed for concistency whith ResliceWarp and ResliceAir % % PW, NRU, 2001 % % The following string defines that this is a reslice module. The % latter part of the string defines what to write on the main interface. % RESLICEDESC interp3 (Matlab) % Check for definition of temp area. Defaults to /tmp global TEMP_AREA; if isempty(TEMP_AREA) TEMP_AREA='/tmp'; end The following reslice modules are supplied with the PVEOut registration package: warp_reslice (mriwarp) (*) reslice (Air 5.0) (*) interp3 (Matlab built-in) Note: The modules marked by asterisks (*) require external programs to reslice data. It is generally recommended to use warp_reslice or interp3, since the reslice program from the Air package does not keep correct bit resolution on the resliced images. Printable version Last Modified: Wednesday, 11-Jan-2006 15:26:30 CET